4xtn » Sodium pumping rhodopsin, NaR, pentamer
- Type: Transmembrane (3 classes)
- Class: Alpha-helical polytopic (156 superfamilies)
- Superfamily: Rhodopsin-like receptors and pumps (12 families) CL0192
- Family: Microbial and algal rhodopsins (85 proteins) 3.E.1 (TCDB) PF01036 IPR001425 PDBsum
- Species: Dokdonia eikasta (3 proteins)
- Localization: Bacterial Gram-negative inner membrane (1251 proteins)
| 4xtn >> Sodium pumping rhodopsin, NaR, pentamer | |
|---|---|
| Hydrophobic Thickness or Depth | 30.2 Å |
| Tilt Angle | 0° |
| ΔGtransfer | -159.3 kcal/mol |
| Links to 4xtn | PDB Sum, PDB, MSD, MMDB, Encompass |
| Topology | subunit A (N terminus periplasm) |
| Resolution | 2.2 |
| Primary PDB represention | 4xtn |
| Other PDB entries representing this structure | 4xto (2.8), 6rew (2.2), 6rex (2.7), 6rez (2.6), 6rf0 (3.0), 6rf1 (2.8), 6rf3 (2.4), 6rf4 (2.4), 6xyt (2.1), 6ybz (2.35), 6yc0 (2.7), 6yc1 (2.2), 6yc2 (2.5), 6yc3 (2.0), 6yc4 (2.6), 6yt4 (2.4) |
| Number of TM secondary structures | 35 |
| Membranome |  |
| Uniprot | N0DKS8_9FLAO |
| Subunits: 5 | |||
|---|---|---|---|
| A - Tilt: 6 - TM segments: 1( 26- 47), 2( 63- 84), 3( 107- 123), 4( 140- 160), 5( 165- 185), 6( 207- 228), 7( 238- 254) | |||
| B - Tilt: 6 - TM segments: 1( 26- 47), 2( 63- 84), 3( 107- 123), 4( 140- 160), 5( 165- 186), 6( 207- 228), 7( 238- 254) | |||
| C - Tilt: 6 - TM segments: 1( 26- 47), 2( 63- 83), 3( 107- 123), 4( 140- 160), 5( 165- 186), 6( 207- 228), 7( 238- 254) | |||
| D - Tilt: 5 - TM segments: 1( 26- 47), 2( 63- 83), 3( 107- 123), 4( 140- 160), 5( 165- 186), 6( 206- 228), 7( 238- 254) | |||
| E - Tilt: 7 - TM segments: 1( 26- 47), 2( 63- 83), 3( 107- 123), 4( 139- 160), 5( 165- 186), 6( 207- 228), 7( 238- 254) | |||